RF3

Sequence-in, folding-trajectory activations out. No PDBs required.


fasta_to_sources → build_inputs → collect → train → eval → screen

Hook	Module path	Collection
`to_si`	`diffusion_module.diffusion_conditioning.to_si`	every step
`block12`	`diffusion_module.diffusion_transformer.blocks.12.conditioned_transition_block`	every 50 steps
`block16`	`diffusion_module.diffusion_transformer.blocks.16.conditioned_transition_block`	every 50 steps
`to_r_update`	`diffusion_module.atom_attention_decoder.to_r_update`	every 50 steps

Hooks config: hooks=rf3_default